Broken shafts are unusual. Especially on a new motor. Usually the pinion will give first. There must be a mesh issue somewhere. Check how the shaft and pinion line up with the spur. Look at the old pinion/ spur and check for uneven wear (like the pinion is worn on one edge only). Since you did a rebuild, double check that everything is properly tightened up (motor mount, centre diff mount, etc).
Also, check that your esc is braking first before allowing you to go in reverse. Unlikely to be the culprit, but going from fwd straight to rev will cause serious shock/ strain to the drivetrain, shaft and motor.
What were you doing when it snapped? With three diffs it's unlikely that it's a shock to the drivetrain from jumping or rough terrain is causing the issue. Besides the WR8 drivetrain was made to handle much bigger wheels (Bullet) and is pretty tough.
Are you running more than 3s? I could see 4s or 6s maybe snapping one just from being so overpowered.
Of course you may just have just been unlucky, but two broken shafts would make me suspicious for sure.